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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6456732 chr6:26514445 T/C ZNF322B chr9:99957633-99961910:- 0.54 10.3 1.35E-22 Box Plot
THCA rs6456733 chr6:26566804 C/T ZNF322B chr9:99957633-99961910:- 0.59 11.41 7.49E-27 Box Plot
THCA rs6456734 chr6:26566965 G/T ZNF322B chr9:99957633-99961910:- 0.59 11.41 7.49E-27 Box Plot
THCA rs6456738 chr6:26594033 T/C ZNF322B chr9:99957633-99961910:- 0.6 9 5.5E-18 Box Plot
THCA rs6456739 chr6:26604140 T/C ZNF322B chr9:99957633-99961910:- 0.69 14.76 6.96E-41 Box Plot
THCA rs6456768 chr6:27093821 G/C ZNF322B chr9:99957633-99961910:- -0.51 -9.01 5.04E-18 Box Plot
THCA rs6456814 chr6:28305812 C/A ZFP57 chr6:29640169-29648887:- 0.38 6.38 4.12E-10 Box Plot
THCA rs6456816 chr6:28311421 C/T ZFP57 chr6:29640169-29648887:- 0.4 6.58 1.24E-10 Box Plot
THCA rs6459191 chr6:57195847 G/A GUSBL2 chr6:58246159-58287724:- -0.33 -6.25 8.93E-10 Box Plot
THCA rs6459193 chr6:57205920 C/T GUSBL2 chr6:58246159-58287724:- -0.3 -5.95 5.21E-9 Box Plot
THCA rs646071 chr1:33609211 A/G EIF5B chr2:99953816-100017789:+ -0.59 -7.12 4.02E-12 Box Plot
THCA rs646071 chr1:33609211 A/G POU2F1 chr1:167190066-167396582:+ -0.47 -6.07 2.59E-9 Box Plot
THCA rs6462443 chr7:33044057 T/C FKBP9L chr7:55748767-55780945:- 0.56 14.2 1.96E-38 Box Plot
THCA rs6462444 chr7:33053000 T/C FKBP9L chr7:55748767-55780945:- 0.4 9.02 4.66E-18 Box Plot
THCA rs6462445 chr7:33053099 A/T FKBP9L chr7:55748767-55780945:- 0.39 8.9 1.13E-17 Box Plot